LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-125b-5p


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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
68359-68384
0.026
3
8mer
188813-188827
0.017
1
8mer
233514-233528
0.014
1
9mer
182854-182863
0.012
3
8mer
60852-60875
0.012
1
7mer
192020-192035
0.009
1
7mer
124951-124956
0.009
9
7mer
123880-123902
0.009
11
7mer
82988-83003
0.009
5
7mer
106028-106041
0.009
1
8mer
88886-88904
0.008
0
7mer
104373-104398
0.008
1
8mer
115979-115999
0.008
1
7mer
210352-210370
0.007
0
8mer
253094-253100
0.006
1
7mer
179322-179336
0.006
5
7mer
207298-207303
0.005
7
7mer
40666-40686
0.005
1
7mer
82683-82699
0.005
4
8mer
239780-239801
0.005
1
7mer
107251-107262
0.004
3
7mer
223906-223923
0.004
0
7mer
89981-90000
0.004
1
8mer
236868-236887
0.004
1
9mer
98086-98105
0.003
0
7mer
87962-87985
0.003
1
7mer
234592-234614
0.003
1
7mer
229646-229669
0.003
0
7mer
21928-21953
0.003
5
7mer
185058-185082
0.003
1
7mer
252961-252977
0.003
2
7mer
188158-188169
0.003
1
7mer
39566-39588
0.003
0
6mer
100684-100704
0.003
6
7mer
209623-209637
0.003
1
7mer
8328-8353
0.003
3
7mer
109288-109311
0.003
1
7mer
43383-43408
0.002
1
6mer
15118-15140
0.002
1
6mer
86441-86463
0.002
7
6mer
163486-163513
0.002
8
7mer
205348-205367
0.002
1
7mer
255124-255146
0.002
0
7mer
218072-218096
0.002
1
7mer
73897-73917
0.002
1
7mer
204980-205005
0.002
0
7mer
52590-52615
0.002
Not Conserved
6mer
181615-181630
0.002
2
7mer
238620-238639
0.002
Not Conserved
6mer
92726-92743
0.002
1
6mer
60640-60666
0.002
2
6mer
124659-124676
0.002
5
7mer
130889-130906
0.002
3
6mer
19093-19100
0.002
1
6mer
130407-130423
0.002
5
6mer
227881-227897
0.002
3
6mer
241606-241623
0.002
1
6mer
145032-145047
0.002
1
6mer
89284-89300
0.002
1
6mer
67176-67201
0.002
0
6mer
198055-198071
0.002
0
6mer
216349-216375
0.002
3
6mer
94360-94365
0.002
1
6mer
207434-207454
0.001
7
6mer
128595-128617
0.001
1
6mer
165345-165365
0.001
2
6mer
150597-150619
0.001
4
6mer
118678-118698
0.001
3
6mer
88291-88305
0.001
4
6mer
126229-126250
0.001
3
6mer
112530-112554
0.001
1
6mer
178372-178398
0.001
2
6mer
72523-72545
0.001
3
6mer
220823-220849
0.001
2
6mer
66398-66422
0.001
0
6mer
87256-87260
0.001
1
6mer
194844-194864
0.001
0
6mer
117094-117114
0.001
0
6mer
212365-212378
0.001
5
6mer
74733-74758
0.001
10
6mer
9961-9986
0.001
0
6mer
211750-211768
0.001
3
6mer
132801-132822
0.001
2
6mer
35455-35477
0.001
1
6mer
153332-153350
0.001
1
6mer
47120-47124
0.001
1
6mer
189838-189859
0.001
0
6mer
185593-185617
0.001
1
6mer
181813-181839
0.001
0
6mer
111988-112012
0.001
0
6mer
214606-214622
0.001
1
6mer
55654-55679
0.001
1
6mer
242358-242381
0.001
0
6mer
30313-30335
0.001
0
6mer
76885-76906
0.001
1
6mer
124298-124316
0.001
1
6mer
41769-41787
0.001
0
6mer
45207-45229
0.001
Not Conserved
6mer
217361-217381
0.001
2
6mer
58649-58676
0.001
1
6mer
22975-22990
0.001
1
6mer
234753-234766
0.001
Not Conserved
6mer
147972-147993
0.001
1
6mer
117761-117785
0.001
0
6mer
259869-259887
0.001
1
6mer
62349-62372
0.001
0
6mer
238956-238960
0.001
1
6mer
120662-120684
0.001
0
6mer
10967-10990
0.001
1
6mer
180232-180244
0.001
1
6mer
39346-39367
0.001
1
6mer
185472-185496
0.001
0
6mer
227666-227686
0.001
0
6mer
78955-78980
0.001
1
6mer
216861-216876
0.001
1
6mer
24027-24051
0.001
0
6mer
238513-238531
0.001
0
6mer
21116-21138
0.001
1
6mer
74656-74675
0.001
1
8mer+mismatch
175469-175495
0.001
Not Conserved
6mer
226012-226035
0.001
0
6mer
29581-29601
0.001
1
6mer
29639-29661
0.001
1
6mer
141384-141401
0.001
1
6mer
189916-189942
0.001
0
6mer
109006-109026
0.001
1
6mer
112859-112877
0.001
0
6mer
211773-211795
0.001
6
6mer
190033-190054
0.001
1
6mer
239603-239630
0.001
0
6mer
190169-190195
0.001
0
6mer
242111-242131
0.001
0
6mer
190084-190110
0.001
0
6mer
189977-189998
0.001
0
6mer
120779-120795
0.001
2
6mer
88037-88054
0.001
2
6mer
190374-190394
0.001
Not Conserved
6mer
190263-190282
0.001
0
6mer
190203-190224
0.001
1
6mer
190339-190365
0.000
0
6mer
190113-190139
0.000
0
6mer
190227-190253
0.000
0
6mer
252985-253008
0.000
1
6mer
74762-74784
0.000
1
6mer
52635-52660
0.000
0
6mer
207494-207509
0.000
2
6mer
117188-117207
0.000
1
6mer
255171-255187
0.000
1
6mer
255175-255195
0.000
1
XLOC_013024
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026972
Biotype: transcript isomorph
Gene id: XLOC_013024
Gene Name: XLOC_013024
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
214-232
0.143
0
8mer
451-474
0.139
0
XLOC_009645
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020306
Biotype: transcript isomorph
Gene id: XLOC_009645
Gene Name: XLOC_009645
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1552-1558
0.131
0
8mer
1346-1352
0.112
0
7mer
1414-1433
0.026
0
7mer
1254-1273
0.007
Not Conserved
RP11-20D14.6
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000514568
Biotype: lincRNA
Gene id: ENSG00000249790
Gene Name: RP11-20D14.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1774-1780
0.134
0
8mer
1568-1574
0.097
0
7mer
1636-1655
0.028
0
7mer
1476-1495
0.007
Not Conserved
RP11-215G15.5
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000607560
Biotype: lincRNA
Gene id: ENSG00000272016
Gene Name: RP11-215G15.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
162-186
0.225
7
7mer
3354-3363
0.021
7
LINC00661
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000552608
Biotype: lincRNA
Gene id: ENSG00000205396
Gene Name: LINC00661
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
931-958
0.206
1
6mer
604-623
0.004
0
RP11-111F5.4
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000377518
Biotype: retained_intron
Gene id: ENSG00000204802
Gene Name: RP11-111F5.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2482-2504
0.059
0
7mer
2360-2385
0.035
0
7mer
2053-2076
0.026
0
7mer
1904-1924
0.025
0
7mer
1700-1727
0.016
0
6mer
494-510
0.011
0
6mer
1746-1766
0.005
0
KCNQ1OT1
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
35467-35482
0.013
0
9mer
43211-43232
0.011
0
7mer
48193-48212
0.010
3
7mer
8349-8355
0.007
Not Conserved
7mer
68791-68814
0.007
0
7mer
72534-72560
0.007
2
7mer
20048-20063
0.007
1
8mer
56935-56960
0.006
1
8mer
54942-54967
0.006
1
7mer
23266-23282
0.005
1
7mer
9445-9460
0.005
1
7mer
2500-2520
0.005
1
7mer
31808-31822
0.003
0
7mer
87230-87235
0.003
1
7mer
64818-64842
0.003
1
7mer
54229-54252
0.003
1
7mer
19137-19157
0.002
1
6mer
67366-67387
0.002
3
7mer
5170-5182
0.002
1
6mer
20406-20426
0.002
0
6mer
85004-85028
0.002
4
7mer
82986-83011
0.002
0
7mer
76592-76611
0.002
0
6mer
56645-56670
0.002
4
6mer
62324-62348
0.002
1
6mer
42696-42713
0.002
3
6mer
52355-52378
0.002
1
6mer
78067-78085
0.002
1
6mer
30503-30520
0.002
0
8mer+mismatch
59582-59597
0.002
1
6mer
90677-90698
0.001
1
6mer
63484-63501
0.001
1
6mer
58463-58479
0.001
1
6mer
58013-58028
0.001
2
6mer
48044-48066
0.001
2
6mer
83284-83299
0.001
1
6mer
82469-82489
0.001
1
6mer
65315-65333
0.001
2
6mer
76690-76706
0.001
1
6mer
83963-83984
0.001
1
6mer
18398-18417
0.001
1
6mer
78662-78671
0.001
1
6mer
80676-80700
0.001
1
6mer
37137-37157
0.001
0
6mer
73470-73483
0.001
0
6mer
79207-79233
0.001
1
6mer
65760-65782
0.001
2
6mer
84397-84422
0.001
1
6mer
48762-48788
0.001
0
6mer
56367-56392
0.001
1
6mer
81556-81578
0.001
1
6mer
71431-71453
0.001
1
6mer
57167-57180
0.001
2
6mer
27922-27933
0.001
0
6mer
63741-63764
0.001
2
8mer
83258-83282
0.001
1
6mer
73025-73042
0.001
2
6mer
76070-76091
0.001
1
6mer
90379-90402
0.001
1
6mer
74310-74331
0.001
0
6mer
81191-81213
0.001
0
6mer
44926-44952
0.001
1
6mer
63655-63677
0.001
1
6mer
72420-72440
0.001
0
6mer
47451-47476
0.001
1
6mer
83704-83720
0.001
2
6mer
55788-55804
0.001
1
6mer
75516-75531
0.001
1
6mer
79117-79133
0.001
1
6mer
44858-44862
0.001
1
6mer
59435-59459
0.001
1
6mer
67345-67371
0.001
2
6mer
83105-83120
0.001
2
6mer
65224-65250
0.000
2
6mer
56917-56941
0.000
0
6mer
84998-85023
0.000
1
AC006548.28
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
23158-23183
0.017
1
8mer
83477-83497
0.008
1
7mer
12566-12591
0.008
7
8mer
59891-59897
0.008
1
8mer
75722-75739
0.007
0
6mer
101-124
0.006
1
7mer
31737-31758
0.005
1
7mer
28410-28432
0.005
1
7mer
65388-65409
0.005
1
8mer
10802-10826
0.005
1
7mer
28667-28687
0.004
1
7mer
77761-77778
0.004
0
7mer
64769-64794
0.004
0
7mer
32617-32638
0.004
1
8mer
18172-18194
0.003
1
7mer
3900-3921
0.003
1
7mer
33416-33421
0.003
0
7mer
52006-52020
0.003
Not Conserved
7mer
39334-39357
0.002
0
6mer
83872-83877
0.002
1
6mer
63720-63742
0.002
1
8mer
82043-82069
0.002
0
6mer
84005-84022
0.002
1
6mer
18834-18851
0.002
2
6mer
73231-73246
0.002
Not Conserved
7mer
59557-59562
0.002
1
7mer
23432-23452
0.002
0
6mer
6093-6120
0.002
1
6mer
24526-24531
0.002
0
6mer
43292-43310
0.001
3
6mer
36585-36600
0.001
2
6mer
69124-69143
0.001
0
6mer
12226-12242
0.001
1
6mer
23465-23490
0.001
1
6mer
17360-17386
0.001
2
7mer
74725-74750
0.001
0
6mer
57658-57684
0.001
1
6mer
16068-16087
0.001
1
6mer
20500-20510
0.001
1
6mer
14856-14866
0.001
1
6mer
24007-24028
0.001
1
7mer
25605-25626
0.001
0
6mer
58904-58929
0.001
1
6mer
78252-78277
0.001
0
6mer
22196-22216
0.001
2
6mer
9496-9517
0.001
0
6mer
48625-48636
0.001
Not Conserved
6mer
71672-71694
0.001
0
6mer
64162-64185
0.001
1
6mer
35082-35098
0.001
1
6mer
82568-82584
0.001
0
6mer
41854-41876
0.001
1
6mer
10723-10748
0.001
2
6mer
51662-51678
0.001
Not Conserved
6mer
15630-15655
0.001
1
7mer
45406-45427
0.001
Not Conserved
7mer
11755-11780
0.001
0
6mer
61173-61187
0.001
0
6mer
11602-11625
0.001
0
6mer
38314-38334
0.001
0
6mer
62701-62722
0.001
1
6mer
74637-74655
0.001
0
6mer
60850-60876
0.001
1
6mer
18448-18474
0.001
0
6mer
23712-23733
0.001
1
6mer
65674-65690
0.001
0
6mer
39859-39882
0.001
1
6mer
39751-39775
0.001
1
6mer
11952-11971
0.001
1
6mer
60721-60747
0.001
1
6mer
11798-11824
0.001
0
6mer
65565-65583
0.001
1
6mer
5837-5857
0.001
1
6mer
39264-39287
0.000
0
6mer
9481-9500
0.000
1
LINC00661
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000549354
Biotype: lincRNA
Gene id: ENSG00000205396
Gene Name: LINC00661
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3143-3170
0.148
1
6mer
1354-1364
0.004
1
6mer
2570-2587
0.003
0
6mer
917-936
0.002
0
MUC19
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000454784
Biotype: processed_transcript
Gene id: ENSG00000205592
Gene Name: MUC19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
23550-23569
0.006
1
7mer
5929-5950
0.005
2
7mer
8439-8464
0.004
2
7mer
8318-8344
0.004
1
7mer
9581-9601
0.003
0
7mer
7668-7687
0.003
0
7mer
8838-8851
0.003
2
7mer
6690-6709
0.003
1
7mer
9671-9691
0.003
1
6mer
821-839
0.003
2
7mer
6839-6859
0.003
2
7mer
6384-6409
0.002
2
7mer
6360-6379
0.002
1
7mer
6254-6268
0.002
1
6mer
6189-6208
0.002
2
7mer
12370-12382
0.002
Not Conserved
7mer
9701-9721
0.002
2
6mer
21179-21202
0.002
1
7mer
7221-7240
0.002
1
7mer
9857-9871
0.001
1
7mer
9609-9631
0.001
1
7mer
13293-13307
0.001
Not Conserved
7mer
6891-6910
0.001
1
7mer
6449-6469
0.001
1
7mer
9104-9121
0.001
0
7mer
10814-10828
0.001
Not Conserved
6mer
7131-7150
0.001
0
7mer
6516-6529
0.001
0
6mer
17791-17804
0.001
Not Conserved
6mer
20326-20353
0.001
1
6mer
13438-13457
0.001
0
6mer
14794-14807
0.001
2
6mer
15064-15077
0.001
0
6mer
22194-22210
0.001
1
6mer
8061-8074
0.001
1
6mer
10935-10948
0.001
0
6mer
17992-18014
0.001
0
6mer
11115-11128
0.001
0
6mer
19109-19133
0.001
1
6mer
9978-9991
0.001
1
6mer
13708-13727
0.001
Not Conserved
6mer
17374-17387
0.001
0
6mer
16384-16397
0.001
Not Conserved
6mer
16257-16277
0.001
0
6mer
16288-16307
0.001
0
6mer
6224-6238
0.001
1
6mer
13141-13160
0.001
0
6mer
9071-9091
0.001
1
6mer
10121-10141
0.001
0
6mer
17658-17684
0.001
Not Conserved
6mer
17576-17597
0.001
0
6mer
18025-18044
0.001
0
6mer
17036-17057
0.001
0
6mer
16024-16037
0.001
0
6mer
10296-10321
0.001
0
6mer
17488-17507
0.001
0
6mer
10068-10081
0.001
0
6mer
12511-12530
0.001
Not Conserved
6mer
9764-9784
0.001
Not Conserved
6mer
11013-11038
0.001
0
6mer
11976-11995
0.001
0
6mer
10625-10651
0.001
0
6mer
10188-10201
0.001
1
6mer
9125-9151
0.001
1
6mer
11733-11758
0.001
1
6mer
14224-14237
0.001
0
6mer
7727-7747
0.001
1
6mer
18091-18104
0.001
0
6mer
15592-15617
0.001
0
6mer
14488-14507
0.001
0
6mer
11798-11818
0.001
0
6mer
16444-16457
0.001
Not Conserved
6mer
12042-12055
0.001
0
6mer
8144-8164
0.001
1
6mer
18229-18254
0.001
0
6mer
10145-10171
0.001
1
6mer
15814-15827
0.001
1
6mer
15508-15527
0.001
0
6mer
17607-17627
0.001
0
6mer
14014-14027
0.001
0
6mer
14638-14657
0.001
Not Conserved
6mer
10601-10621
0.001
0
6mer
13177-13190
0.001
0
6mer
16942-16967
0.001
0
6mer
16618-16637
0.001
0
6mer
12570-12590
0.001
0
6mer
10002-10021
0.001
1
6mer
13057-13070
0.001
0
6mer
10542-10561
0.001
0
6mer
12841-12860
0.001
1
6mer
15387-15407
0.001
0
6mer
11880-11905
0.001
0
6mer
10212-10231
0.001
1
6mer
10420-10441
0.001
0
6mer
12132-12145
0.001
0
6mer
11464-11488
0.001
0
6mer
15658-15677
0.001
Not Conserved
6mer
16042-16067
0.000
0
6mer
11205-11218
0.000
0
6mer
13858-13877
0.000
Not Conserved
6mer
14248-14267
0.000
0
6mer
12775-12800
0.000
0
6mer
12060-12085
0.000
0
6mer
17183-17207
0.000
0
6mer
16324-16337
0.000
Not Conserved
6mer
11823-11848
0.000
0
6mer
11946-11965
0.000
0
6mer
11439-11458
0.000
0
6mer
17422-17447
0.000
0
6mer
18264-18284
0.000
0
6mer
10449-10471
0.000
0
6mer
16804-16817
0.000
0
6mer
16707-16727
0.000
Not Conserved
6mer
15214-15227
0.000
0
6mer
11767-11788
0.000
0
6mer
15238-15257
0.000
0
6mer
14038-14057
0.000
0
6mer
15838-15857
0.000
0
6mer
18151-18164
0.000
0
6mer
17158-17177
0.000
0
6mer
15961-15977
0.000
0
6mer
13561-13577
0.000
0
6mer
16888-16907
0.000
0
6mer
18109-18134
0.000
0
6mer
17398-17417
0.000
0
6mer
11171-11188
0.000
0
6mer
12865-12890
0.000
0
6mer
11589-11608
0.000
0
6mer
15087-15107
0.000
0
6mer
11643-11668
0.000
0
6mer
12727-12740
0.000
Not Conserved
6mer
11618-11638
0.000
Not Conserved
6mer
15360-15377
0.000
0
6mer
17128-17147
0.000
Not Conserved
6mer
16763-16787
0.000
Not Conserved
6mer
16648-16667
0.000
0
6mer
10656-10681
0.000
0
6mer
10698-10711
0.000
Not Conserved
6mer
18048-18074
0.000
0
6mer
13882-13907
0.000
0
6mer
11048-11068
0.000
Not Conserved
6mer
9797-9814
0.000
1
6mer
16498-16517
0.000
Not Conserved
6mer
14668-14687
0.000
0
6mer
17844-17864
0.000
0
6mer
17092-17117
0.000
0
6mer
14161-14177
0.000
0
6mer
14572-14597
0.000
0
6mer
13021-13040
0.000
Not Conserved
6mer
13792-13817
0.000
0
6mer
14332-14357
0.000
0
6mer
12004-12025
0.000
0
6mer
11523-11548
0.000
0
6mer
12185-12205
0.000
0
6mer
12691-12710
0.000
Not Conserved
6mer
16738-16757
0.000
Not Conserved
6mer
15691-15707
0.000
0
6mer
17242-17267
0.000
0
6mer
14120-14147
0.000
0
6mer
16102-16127
0.000
0
6mer
14932-14957
0.000
0
6mer
12810-12830
0.000
0
6mer
12955-12980
0.000
0
6mer
11910-11935
0.000
0
6mer
16552-16577
0.000
0
6mer
9827-9844
0.000
0
6mer
12895-12920
0.000
0
6mer
17899-17924
0.000
0
6mer
12215-12235
0.000
Not Conserved
6mer
11409-11428
0.000
0
6mer
13912-13937
0.000
0
6mer
13827-13847
0.000
Not Conserved
6mer
10959-10978
0.000
0
6mer
15147-15167
0.000
Not Conserved
6mer
15712-15737
0.000
0
6mer
14878-14897
0.000
Not Conserved
6mer
17272-17297
0.000
0
6mer
14401-14417
0.000
Not Conserved
6mer
10392-10411
0.000
Not Conserved
6mer
10272-10291
0.000
Not Conserved
6mer
16680-16697
0.000
0
6mer
17068-17087
0.000
Not Conserved
6mer
13201-13220
0.000
0
6mer
14607-14627
0.000
Not Conserved
6mer
10989-11008
0.000
0
6mer
11319-11338
0.000
0
6mer
17815-17834
0.000
0
6mer
11253-11278
0.000
0
6mer
11373-11398
0.000
0
6mer
15862-15887
0.000
0
6mer
13492-13517
0.000
Not Conserved
6mer
12991-13010
0.000
0
6mer
13468-13487
0.000
0
6mer
15262-15287
0.000
0
6mer
15892-15917
0.000
Not Conserved
6mer
11288-11308
0.000
0
6mer
12158-12175
0.000
0
6mer
10482-10501
0.000
0
6mer
14811-14837
0.000
0
6mer
16587-16607
0.000
Not Conserved
6mer
15112-15137
0.000
Not Conserved
6mer
14278-14297
0.000
0
6mer
15748-15767
0.000
Not Conserved
6mer
10722-10741
0.000
1
6mer
15421-15437
0.000
Not Conserved
6mer
11348-11368
0.000
0
6mer
14062-14087
0.000
0
RP11-440L14.4
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000607877
Biotype: antisense
Gene id: ENSG00000272588
Gene Name: RP11-440L14.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
303-309
0.154
1
LINC00987
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: NR_036466.1
Biotype: lincRNA
Gene id: NR_036466.1 (gene)
Gene Name: LINC00987
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2058-2078
0.089
7
8mer
2265-2284
0.052
4
7mer
367-386
0.004
0
7mer
1479-1499
0.003
Not Conserved
LINC00987
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000427111
Biotype: lincRNA
Gene id: ENSG00000237248
Gene Name: LINC00987
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2058-2078
0.089
7
8mer
2265-2284
0.052
4
7mer
367-386
0.004
0
7mer
1479-1499
0.003
Not Conserved
GLIDR
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: NR_015363.1
Biotype: lincRNA
Gene id: NR_015363.1 (gene)
Gene Name: GLIDR
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2480-2502
0.061
1
7mer
2358-2383
0.035
1
7mer
1680-1707
0.016
1
6mer
474-490
0.011
1
7mer
1884-1904
0.007
0
7mer
2033-2056
0.007
0
6mer
1726-1746
0.005
1
RP11-15H20.6
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000601239
Biotype: retained_intron
Gene id: ENSG00000213971
Gene Name: RP11-15H20.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2294-2308
0.142
1
XLOC_007690
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015562
Biotype: transcript isomorph
Gene id: XLOC_007690
Gene Name: XLOC_007690
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2879-2901
0.061
1
7mer
2757-2782
0.035
1
7mer
2042-2069
0.015
1
7mer
2246-2266
0.007
0
6mer
836-852
0.007
1
7mer
2395-2418
0.007
0
6mer
2088-2108
0.005
1
6mer
290-302
0.003
Not Conserved
RP11-83A24.2
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000608345
Biotype: antisense
Gene id: ENSG00000273247
Gene Name: RP11-83A24.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
203-217
0.140
2
RP11-211N8.2
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000446626
Biotype: lincRNA
Gene id: ENSG00000226007
Gene Name: RP11-211N8.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
77-99
0.057
1
7mer
196-221
0.032
1
7mer
854-881
0.015
1
6mer
2072-2088
0.014
1
7mer
657-677
0.007
0
7mer
505-528
0.007
0
6mer
815-835
0.005
1
LCMT1-AS2
hsa-miR-125b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565214
Biotype: antisense
Gene id: ENSG00000260034
Gene Name: LCMT1-AS2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-125b-5p
Sequence: ucccugagacccuaacuuguga
MirBase ID: MIMAT0000423
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5-23
0.057
1
8mer
349-376
0.031
0
7mer
2785-2801
0.020
1
6mer
5372-5398
0.013
1
6mer
437-449
0.004
0
8mer
2690-2701
0.004
0
6mer
4783-4803
0.003
0
6mer
4125-4150
0.003
0
6mer
2052-2068
0.002
0
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